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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FOXA3, forkhead box A3
Sequence ID:NM_004497
Entrez Gene ID:3171
Ensembl ID:ENSG00000170608

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2-q13.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 46367588 - 46376361

NM_004497 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12664636751746367782
26719884637533246377053

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3908052Full LengthBC016024forkhead box A3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004488  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004497 NP_004488 P55318 Fork_head
Fork_head_N

Related Sequences

 
mRNAGenPeptSwissProt
L12141 AAA58477 P55318
BC016024 AAH16024 P55318
BT006720 AAP35366 P55318
AK223473 BAD97193 P55318

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOXA3 NP_004488 M.musculus Foxa3 15377 Gene Info NP_032286 90
R.norvegicus Foxa3 25100   NP_058773 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)