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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TTL, tubulin tyrosine ligase
Sequence ID:NM_153712
Entrez Gene ID:150465
Ensembl ID:ENSG00000114999

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 113287011 - 113289983

NM_153712 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1336113239742113240077
337415113243493113243571
416648113251719113251951
649784113258782113258917
7851054113260488113260757
10551198113277858113278001
11995159113286257113290217

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5767758Full LengthBC036819tubulin tyrosine ligase
4560661IncompleteBC036707tubulin tyrosine ligase
4815653IncompleteBC046913tubulin tyrosine ligase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_714923  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_153712 NP_714923 Q8NG68 EC 6.3.2.25 TTL

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC036819 AAH36819 Q8NG68 EC 6.3.2.25
DQ894075 ABM85001    
AB071393 BAC06832 Q8NG68 EC 6.3.2.25
BX538316 CAD98091 Q8NG68 EC 6.3.2.25

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TTL NP_714923 R.norvegicus Ttl 171572   NP_612545 95
M.musculus Ttl 69737 Gene Info NP_081468 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)