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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TRIT1, tRNA isopentenyltransferase 1
Sequence ID:NM_017646
Entrez Gene ID:54802
Ensembl ID:ENSG00000043514

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 40306727 - 40349177

 Exon Info From UCSC:
NM_017646

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4594069Full LengthBC107569tRNA isopentenyltransferase 1
40112695Full LengthBC128155tRNA isopentenyltransferase 1
40112698Full LengthBC128156tRNA isopentenyltransferase 1
3905836IncompleteBC010741tRNA isopentenyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060116  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017646 NP_060116 Q9H3H1 EC 2.5.1.75 IPPT

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF074918 AAG31324 Q9H3H1 EC 2.5.1.75
BC010741 AAH10741 Q9H3H1
Q5QPK7
EC 2.5.1.75
BC107569 AAI07570 Q9H3H1 EC 2.5.1.75
BC128155 AAI28156 Q9H3H1 EC 2.5.1.75
BC128156 AAI28157 I6L9K0  
AY052768 AAL14107 Q9H3H1 EC 2.5.1.75
AY303390 AAP60111 Q9H3H1 EC 2.5.1.75
AY702933 AAW63394 Q3T7C7  
AY702934 AAW63395 Q3T7C6  
AY702935 AAW63396 Q3T7C5  
AY702936 AAW63397 Q3T7C3  
AY702937 AAW63398 Q3T7C3  
AY702938 AAW63399 Q3T7C3  
AY702939 AAW63400 Q3T7C3  
AY702940 AAW63401 Q3T7C3  
AY702941 AAW63402 Q3T7B8  
AY702942 AAW63403 Q3T7B8  
AY702943 AAW63404 Q3T7B8  
AY702944 AAW63405 Q3T7B5  
AY702945 AAW63406 Q3T7B5  
AY702946 AAW63407 Q3T7B4  
AK000068 BAA90923 Q9H3H1 EC 2.5.1.75
AK223478 BAD97198 Q53F11  
AK296453 BAG59101 B4DK89  
AK304759 BAG65514 B4E3K2  
CR457226 CAG33507 Q9H3H1 EC 2.5.1.75

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRIT1 NP_060116 M.musculus Trit1 66966 Gene Info NP_080149 89
R.norvegicus Trit1 362586   NP_001102146 89
S.cerevisiae MOD5 854448   NP_014917 37
C.elegans gro-1 175725   NP_498122 36
S.pombe tit1 2543065   NP_593436 36
N.crassa NCU10185 3874981   XP_958834 36
A.thaliana IPT2 817322   NP_565658 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)