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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. UBB, ubiquitin B
Sequence ID:NM_018955
RefSeqGene ID:NG_023320
Entrez Gene ID:7314
Ensembl ID:ENSG00000170315

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
CLEFT PALATE AND MENTAL RETARDATIONSATB2

Cytogenetic Location (from UniGene)

Cytogenetic Location:17p12-p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 16284408 - 16286053

NM_018955 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11321628436616284497
1339701628521516286052

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820408Full LengthBC000379ubiquitin B
3879581Full LengthBC046123ubiquitin B
3929901Full LengthBC015127ubiquitin B
4126622Full LengthBC009301ubiquitin B
4280629Full LengthBC026301ubiquitin B
4715377Full LengthBC031027ubiquitin B
4943285Full LengthBC038999ubiquitin B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061828  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018955 NP_061828 Q5U5U6 ubiquitin

Related Sequences

 
mRNAGenPeptSwissProt
BC000379 AAH00379 Q5U5U6
P0CG47
BC009301 AAH09301 Q5U5U6
P0CG47
BC015127 AAH15127 Q5U5U6
P0CG47
BC026301 AAH26301 Q5U5U6
P0CG47
BC031027 AAH31027 Q5U5U6
P0CG47
BC038999 AAH38999 Q5U5U6
BC046123 AAH46123 Q5U5U6
P0CG47
BT020104 AAV38907 Q5U5U6
AK300882 BAG62524 B4DV12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBB NP_061828 A.thaliana UBQ12 841949   NP_564675 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)