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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. VDAC2, voltage-dependent anion channel 2
Sequence ID:NM_001184783
NM_001184823
NM_003375
NR_033675
Entrez Gene ID:7417
Ensembl ID:ENSG00000165637

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 76970592 - 76991202

 Exon Info From UCSC:
NM_001184783
NM_001184823
NM_003375

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2901130Full LengthBC000165voltage-dependent anion channel 2
3875077Full LengthBC012883voltage-dependent anion channel 2
6137879Full LengthBC072407voltage-dependent anion channel 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003366  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001184783 NP_001171712    
NM_001184823 NP_001171752    
NM_003375 NP_003366 P45880 Porin_3

Related Sequences

 
mRNAGenPeptSwissProt
L08666 AAA60144 P45880
L08666 AAA60145 P45880
L06328 AAB59457 P45880
BC000165 AAH00165 P45880
BC012883 AAH12883 P45880
BC072407 AAH72407 P45880
DQ890934 ABM81860  
DQ894097 ABM85023  
AK296635 BAG59237 B4DKM5
AK315919 BAH14290 B4DKM5
CR456964 CAG33245 P45880

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VDAC2 NP_001171752 R.norvegicus Vdac2 83531   NP_112644 97
M.musculus Vdac2 22334 Gene Info NP_035825 97
A.gambiae AgaP_AGAP009833 1279252   XP_318947 63
D.melanogaster porin 34500   NP_476813 62
C.elegans R05G6.7 177524   NP_501211 42
A.thaliana VDAC3 831361   NP_001190314 28
A.thaliana VDAC1 820914   NP_186777 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)