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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RNPS1, RNA binding protein S1, serine-rich domain
Sequence ID:NM_006711
Entrez Gene ID:10921
Ensembl ID:ENSG00000205937

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 2303964 - 2314644

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2959954Full LengthBC001659RNA binding protein S1, serine-rich domain
2959954Full LengthBC001838RNA binding protein S1, serine-rich domain
6151864Full LengthBC108316RNA binding protein S1, serine-rich domain

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542161  NP_006702  

Protein Infomation

NM_006711 NP_006702 Q15287 RRM_1
NM_080594 NP_542161 Q15287 RRM_1

Related Sequences

L37368 AAA92859 Q15287
AF015608 AAC39791 Q15287
AF247662 AAF72519 Q15287
BC001659 AAH01659 Q15287
BC001838 AAH01838 Q15287
BC108316 AAI08317 Q15287
AF274003 AAL56665 Q15287
DQ895514 ABM86440  
EU176344 ABW03795  
AK289955 BAF82644 Q15287
AK293343 BAG56859 Q15287
AK303100 BAG64209 Q15287
AK316132 BAH14503 Q15287
AB445101 BAI99736 D3DU92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens RNPS1 NP_006702 M.musculus Rnps1 19826 Gene Info NP_001073596 100
R.norvegicus Rnps1 287113   NP_001011890 100
C.elegans rnp-5 175244   NP_497276 49
A.gambiae AgaP_AGAP009570 1278931   XP_318582 47
D.melanogaster RnpS1 41147   NP_649903 47
A.thaliana SR45 838230   NP_001185014 46
N.crassa NCU09901 3874163   XP_958016 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)