Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SCRT2, scratch homolog 2, zinc finger protein (Drosophila)
Sequence ID:NM_033129
Entrez Gene ID:85508
Ensembl ID:ENSG00000215397

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 642239 - 656823

NM_033129 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
192883642240645104
28843594656112656822

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068939BC172245scratch homolog 2, zinc finger protein (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149120  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033129 NP_149120 Q9NQ03 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC172245 AAI72245  
AY129025 AAM98768 Q9NQ03

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SCRT2 NP_149120 M.musculus Scrt2 545474 Gene Info NP_001153882 93
R.norvegicus Scrt2 366229   XP_345456 92
D.melanogaster scrt 38469   NP_523911 70
A.gambiae AgaP_AGAP006791 1270274   XP_308956 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)