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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNIP1, TNFAIP3 interacting protein 1
Sequence ID:NM_001252385
NM_001252386
NM_001252390
NM_001252391
NM_001252392
NM_001252393
NM_001258454
NM_001258455
NM_001258456
NM_006058
RefSeqGene ID:NG_030590
Entrez Gene ID:10318
Ensembl ID:ENSG00000145901

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q32-q33.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 150410249 - 150444656


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4040118Full LengthBC014008TNFAIP3 interacting protein 1
4549542Full LengthBC012133TNFAIP3 interacting protein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252385 NP_001239314    
NM_001252386 NP_001239315    
NM_001252390 NP_001239319    
NM_001252391 NP_001239320    
NM_001252392 NP_001239321    
NM_001252393 NP_001239322    
NM_001258454 NP_001245383    
NM_001258455 NP_001245384    
NM_001258456 NP_001245385    
NM_006058 NP_006049 Q15025  

Related Sequences

 
mRNAGenPeptSwissProt
U83844 AAB41438 Q15025
U39403 AAC99999 Q15025
AY012155 AAG42154 Q15025
BC012133 AAH12133 Q15025
BC014008 AAH14008 Q15025
DQ893467 ABM84393  
DQ896340 ABM87339  
D30755 BAA06416 Q15025
AB177543 BAF34946 Q05KP4
AB177544 BAF34947 Q05KP3
AB252970 BAF48787 A4F1W8
AB252971 BAF48788 A4F1W9
AB252972 BAF48789 A4F1W8
AB252973 BAF48790 A4F1W9
AB252974 BAF48791 A4F1X2
AB252975 BAF48792 A4F1X2
AB252976 BAF48793 A4F1X4
AB252977 BAF48794 A4F1X5
AB252978 BAF48795 A4F1X6
AB252979 BAF48796 A4F1X7
AB252980 BAF48797 A4F1X6
AB252981 BAF48798 A4F1X9
AB252982 BAF48799 A4F1Y0
AK290999 BAF83688 A8K4N4
AK298685 BAH12846 B7Z5B0
AK299975 BAH13185 B7Z699
AK303573 BAH13988 B7Z8K2
AJ011895 CAA09855 Q15025
AJ011896 CAA09856 Q15025
BX640647 CAE45793 Q6N077

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNIP1 NP_006049 M.musculus Tnip1 57783 Gene Info NP_067302 84
R.norvegicus Tnip1 363599   NP_001102296 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)