Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB39A, RAB39A, member RAS oncogene family
Sequence ID:NM_017516
Entrez Gene ID:54734
Ensembl ID:ENSG00000179331

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 107799228 - 107833300

NM_017516 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1245107799276107799520
2461780107832671107834205

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5197104Full LengthBC028064RAB39, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059986  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017516 NP_059986 Q14964 Ras

Related Sequences

 
mRNAGenPeptSwissProt
BC028064 AAH28064 Q14964
JF432634 ADZ15851  
AK292969 BAF85658 Q14964
X99962 CAA68227 Q14964

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB39A NP_059986 M.musculus Rab39 270160 Gene Info NP_780771 97
R.norvegicus Rab39a 315668   NP_001101618 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)