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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATHL1, ATH1, acid trehalase-like 1 (yeast)
Sequence ID:NM_025092
Entrez Gene ID:80162
Ensembl ID:ENSG00000142102

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 290681 - 295676

 Exon Info From UCSC:
NM_025092

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40024867Full LengthBC109257ATH1, acid trehalase-like 1 (yeast)
40024874Full LengthBC109258ATH1, acid trehalase-like 1 (yeast)
5018444IncompleteBC066641ATH1, acid trehalase-like 1 (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079368  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025092 NP_079368 Q32M88 Glyco_hydro_65m

Related Sequences

 
mRNAGenPeptSwissProt
BC109257 AAI09258 Q32M88
BC109258 AAI09259 Q32M88
AK026288 BAB15431 Q32M88
AK074155 BAB84981 Q32M88
AK090428 BAC03409 Q8NF51
AK296137 BAG58879 B4DJL7
AL832932 CAH56316 Q32M88

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATHL1 NP_079368 M.musculus Athl1 212974 Gene Info NP_663362 78
R.norvegicus Athl1 309103   XP_002728877 78
A.gambiae AgaP_AGAP008548 4578326   XP_001237582 36
D.melanogaster CG16965 34607   NP_609528 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)