Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HCN1, hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Sequence ID:NM_021072
Entrez Gene ID:348980
Ensembl ID:ENSG00000164588

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 45262108 - 45695832

NM_021072 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1935784525935245262911
357937434526719045267354
374439844530370045303940
398541314535320145353347
413243504539659345396811
435145124546194745462108
451349364564528645645709
493753864569577045696219

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069224Full LengthBC172530hyperpolarization activated cyclic nucleotide-gated potassium channel 1
100063038BC156454hyperpolarization activated cyclic nucleotide-gated potassium channel 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066550  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021072 NP_066550 O60741
Q86WJ6
cNMP_binding
Ion_trans
Ion_trans_N

Related Sequences

 
mRNAGenPeptSwissProt
AF064876 AAC39759 O60741
BC156454 AAI56455 O60741
BC172530 AAI72530  
AF488549 AAO49469 Q86WJ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HCN1 NP_066550 R.norvegicus Hcn1 84390   NP_445827 97
M.musculus Hcn1 15165 Gene Info NP_034538 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)