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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SRSF10, serine/arginine-rich splicing factor 10
Sequence ID:NM_001191005
NM_001191006
NM_001191007
NM_001191009
NM_006625
NM_054016
NR_034035
Entrez Gene ID:10772
Ensembl ID:ENSG00000188529

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 24294112 - 24306774

 Exon Info From UCSC:
NM_001191005
NM_001191006
NM_001191007
NM_001191009
NM_006625
NM_054016

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3504780Full LengthBC001107FUS interacting protein (serine/arginine-rich) 1
3531441Full LengthBC005039FUS interacting protein (serine/arginine-rich) 1
4302658Full LengthBC010074FUS interacting protein (serine/arginine-rich) 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006616  NP_473357  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001191005 NP_001177934    
NM_001191006 NP_001177935    
NM_001191007 NP_001177936    
NM_001191009 NP_001177938    
NM_006625 NP_006616   RRM_1
NM_054016 NP_473357 O75494 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
AF067730 AAC26727 O75494
AF047448 AAC70918 O75494
BC001107 AAH01107 O75494
BC005039 AAH05039 O75494
BC010074 AAH10074 O75494
BC071575 AAH71575 Q6IQ42
AF419331 AAL16665 O75494
AF449427 AAL57514 O75494
AY150180 AAN65380 O75494
AY150181 AAN65381 O75494
HQ448699 ADQ33177  
AK001286 BAA91601 O75494
AK222994 BAD96714 Q53GD7
AK001656 BAG50956 O75494
AK055311 BAG51498 B3KNY6
AK125834 BAG54253 B3KNY6
AK296175 BAG58911 O75494

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SRSF10 NP_473357 H.sapiens LOC100505793 100505793   XP_003119131 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)