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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ACER1, alkaline ceramidase 1
Sequence ID:NM_133492
Entrez Gene ID:125981
Ensembl ID:ENSG00000167769

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 6306724 - 6333562

NM_133492 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
138463065096306892
38552263071636307300
52366063097076309844
66180263121596312300
80391763123956312509
918108863334696333639

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8327590Full LengthBC112122alkaline ceramidase 1
8327592Full LengthBC112124alkaline ceramidase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_597999  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_133492 NP_597999 Q8TDN7 EC 3.5.1.23 aPHC

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC112122 AAI12123 Q8TDN7 EC 3.5.1.23
BC112124 AAI12125 Q8TDN7 EC 3.5.1.23
AF347024 AAL83822 Q8TDN7 EC 3.5.1.23

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACER1 NP_597999 M.musculus Acer1 171168 Gene Info NP_783858 80
R.norvegicus Acer1 301118   NP_001100345 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)