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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDGFD, platelet derived growth factor D
Sequence ID:NM_025208
NM_033135
Entrez Gene ID:80310
Ensembl ID:ENSG00000170962

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 103780262 - 104034811

 Exon Info From UCSC:
NM_025208
NM_033135

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4824526Full LengthBC030645platelet derived growth factor D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149126  NP_079484  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025208 NP_079484 Q9GZP0 CUB
NM_033135 NP_149126   CUB

Related Sequences

 
mRNAGenPeptSwissProt
AF113216 AAG39287 Q9GZP0
BC030645 AAH30645 Q9GZP0
AY027517 AAK20081 Q9GZP0
AY027518 AAK20082 Q9GZP0
AF335584 AAK38840 Q9GZP0
AF336376 AAK56136 Q9GZP0
AY359116 AAQ89474 Q9GZP0
JF432532 ADZ15749  
AB033832 BAB18903 Q9GZP0
AK292801 BAF85490 Q9GZP0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDGFD NP_079484 R.norvegicus Pdgfd 66018   NP_076452 87
M.musculus Pdgfd 71785 Gene Info NP_082200 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)