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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SLC38A10, solute carrier family 38, member 10
Sequence ID:NM_001037984
Entrez Gene ID:124565
Ensembl ID:ENSG00000157637

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 79218799 - 79219235

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3028844Full LengthBC014642solute carrier family 38, member 10
3618147IncompleteBC011702hypothetical protein MGC15523
4248198IncompleteBC020925solute carrier family 38, member 10
4337090IncompleteBC014156hypothetical protein MGC15523

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_612637  

Protein Infomation

NM_001037984 NP_001033073 Q9HBR0  
NM_138570 NP_612637   Aa_trans

Related Sequences

BC014642 AAH14642 Q9HBR0
BC020925 AAH20925 Q8WW39
AK093037 BAC04027 Q9HBR0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SLC38A10 NP_001033073 M.musculus Slc38a10 72055 Gene Info NP_001158270 71
R.norvegicus Slc38a10 303740   XP_002727893 71
A.gambiae AgaP_AGAP001923 1281202   XP_321141 33
C.elegans Y51F10.4 245996   NP_001032988 32
D.melanogaster CG30394 37437   NP_611578 30
A.thaliana AT3G56200 824786   NP_191179 29
A.thaliana AT2G40420 818635   NP_181573 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)