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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GSX1, GS homeobox 1
Sequence ID:NM_145657
Entrez Gene ID:219409
Ensembl ID:ENSG00000169840

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 28366779 - 28368089

NM_145657 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14602836677928367238
4618472836770228368088

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100064172Full LengthBC160140GS homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_663632  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145657 NP_663632 Q9H4S2 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC160140 AAI60140 Q9H4S2
AB044157 BAB78692 Q9H4S2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GSX1 NP_663632 M.musculus Gsx1 14842 Gene Info NP_032204 98
R.norvegicus Gsx1 288457   XP_221885 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)