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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PTF1A, Pancreas specific transcription factor, 1a
Sequence ID:NM_178161
RefSeqGene ID:NG_009798
Entrez Gene ID:256297
Ensembl ID:ENSG00000168267

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DIABETES MELLITUS, PERMANENT NEONATAL, WITH CEREBELLAR AGENESIS 

Cytogenetic Location (from UniGene)

Cytogenetic Location:10p12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_178161 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17842348145923482242
78513312348263223483178

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069251Full LengthBC172557pancreas specific transcription factor, 1a
100068946BC172252pancreas specific transcription factor, 1a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_835455  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178161 NP_835455 Q7RTS3 HLH

Related Sequences

 
mRNAGenPeptSwissProt
AF181999 AAG09441 Q7RTS3
BC172252 AAI72252  
BC172557 AAI72557 Q7RTS3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTF1A NP_835455 R.norvegicus Ptf1a 117034   NP_446416 91
M.musculus Ptf1a 19213 Gene Info NP_061279 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)