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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. POLR2K, polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
Sequence ID:NM_005034
Entrez Gene ID:5440
Ensembl ID:ENSG00000147669

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 101162880 - 101165841

NM_005034 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
199101162838101162936
100169101163574101163643
170262101164051101164143
263970101165521101166228

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3452723Full LengthBC000806polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
3860080Full LengthBC018157polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005025  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005034 NP_005025 P53803 DNA_RNApol_7kD

Related Sequences

 
mRNAGenPeptSwissProt
BC000806 AAH00806 P53803
BC018157 AAH18157 P53803
DQ891159 ABM82085  
DQ894340 ABM85266  
Z47727 CAA87656 P53803
CR456870 CAG33151 P53803

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens POLR2K NP_005025 M.musculus Gm14567 100046796   XP_003085302 98
M.musculus Polr2k 17749 Gene Info NP_001034457 98
M.musculus Gm19601 100503231   XP_003085403 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)