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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC16A4, solute carrier family 16, member 4 (monocarboxylic acid transporter 5)
Sequence ID:NM_001201546
NM_001201547
NM_001201548
NM_001201549
NM_004696
Entrez Gene ID:9122
Ensembl ID:ENSG00000168679

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 110905546 - 110933648

Transcript StartTranscript EndChromosomal Start Chromosomal End
11011110905504110906514
10121105110918079110918172
11061317110919571110919782
13181821110921474110921977
18221983110923603110923764
19842127110924273110924416
21282260110925455110925587
22612379110931858110931976
23802529110933486110933635

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4050756Full LengthBC021664solute carrier family 16, member 4 (monocarboxylic acid transporter 5)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004687  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001201546 NP_001188475    
NM_001201547 NP_001188476    
NM_001201548 NP_001188477    
NM_001201549 NP_001188478    
NM_004696 NP_004687 O15374 MFS_1

Related Sequences

 
mRNAGenPeptSwissProt
U59185 AAB72035 O15374
BC021664 AAH21664 Q8WU09
AK223307 BAD97027 Q53FH9
AK290720 BAF83409 A8K3V5
AK313735 BAG36476 O15374
AK295946 BAG58729 B4DJ67
AK298539 BAG60739 B4DPX7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC16A4 NP_004687 M.musculus Slc16a4 229699 Gene Info NP_666248 83
R.norvegicus Slc16a4 295356   NP_001013935 83
A.gambiae AgaP_AGAP000040 1272237   XP_311120 35
D.melanogaster Mct1 31198   NP_477334 34
C.elegans C10E2.6 181724   NP_510705 31
C.elegans T02G5.12 187995   NP_495464 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)