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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SUMF1, sulfatase modifying factor 1
Sequence ID:NM_001164674
NM_001164675
NM_182760
RefSeqGene ID:NG_016225
Entrez Gene ID:285362
Ensembl ID:ENSG00000144455

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 4402829 - 4508937

 Exon Info From UCSC:
NM_001164674
NM_001164675
NM_182760

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5760490Full LengthBC110862sulfatase modifying factor 1
40120670Full LengthBC121122sulfatase modifying factor 1
40120671Full LengthBC121123sulfatase modifying factor 1
4430514IncompleteBC017005sulfatase modifying factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_877437  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164674 NP_001158146    
NM_001164675 NP_001158147    
NM_182760 NP_877437 Q8NBK3 DUF323

Related Sequences

 
mRNAGenPeptSwissProt
BC017005 AAH17005 Q8NBK3
BC110862 AAI10863 Q8NBK3
BC121122 AAI21123 Q8NBK3
BC121123 AAI21124 Q0VAC6
AY208752 AAO34683 Q8NBK3
AY323910 AAP86217 Q8NBK3
AY358092 AAQ88459 Q8NBK3
AK057983 BAB71625 Q8NBK3
AK075459 BAC11634 Q8NBK3
AK295240 BAG58233 B4DHS1
AK302018 BAG63417 B4DXK5
AB448737 BAH11168 Q8NBK3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SUMF1 NP_877437 R.norvegicus Sumf1 362409   NP_001102109 88
M.musculus Sumf1 58911 Gene Info NP_666049 87
D.melanogaster CG7049 38022   NP_612003 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)