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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SNCG, synuclein, gamma (breast cancer-specific protein 1)
Sequence ID:NM_003087
RefSeqGene ID:NG_008783
Entrez Gene ID:6623
Ensembl ID:ENSG00000173267

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23.2-q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 88718449 - 88722897

NM_003087 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12888871828788718574
2893308871938988719430
3314588871975788719884
4595308872236088722431
5318268872272188723016

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4546444Full LengthBC014098synuclein, gamma (breast cancer-specific protein 1)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003078  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003087 NP_003078 O76070 Synuclein

Related Sequences

 
mRNAGenPeptSwissProt
AF010126 AAB64109 O76070
AF017256 AAC36550 O76070
BC014098 AAH14098 O76070
Q6FHG5
AF411524 AAL05870 O76070
DQ892334 ABM83260  
DQ892505 ABM83431  
DQ895719 ABM86645  
EU019993 ABS18760 A9XXE1
EU176715 ABW03516  
AK223367 BAD97087 Q6FHG5
AK312141 BAG35077 Q6FHG5
CR541788 CAG46587 O76070
Q6FHG5
CR541790 CAG46589 Q6FHG5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNCG NP_003078 M.musculus Sncg 20618 Gene Info NP_035560 89
R.norvegicus Sncg 64347   NP_113876 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)