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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PNLDC1, Poly(A)-specific ribonuclease (PARN)-like domain containing 1
Sequence ID:NM_173516
Entrez Gene ID:154197
Ensembl ID:ENSG00000146453

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 160221305 - 160241735

 Exon Info From UCSC:
NM_173516

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8327714Full LengthBC112246poly(A)-specific ribonuclease (PARN)-like domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775787  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173516 NP_775787 Q8NA58 CAF1

Related Sequences

 
mRNAGenPeptSwissProt
BC112246 AAI12247 Q8NA58
HQ258459 ADR83213  
AK093139 BAC04070 Q8NA58
AK097559 BAC05101 Q8NA58

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PNLDC1 NP_775787 M.musculus Pnldc1 240023 Gene Info NP_001030038 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)