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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. BLOC1S2, biogenesis of lysosomal organelles complex-1, subunit 2
Sequence ID:NM_001001342
NM_173809
NR_046296
NR_046314
NR_046315
Entrez Gene ID:282991
Ensembl ID:ENSG00000196072

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 102034457 - 102046431

 Exon Info From UCSC:
NM_001001342
NM_173809

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3900723Full LengthBC020494biogenesis of lysosomal organelles complex-1, subunit 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173809 NP_776170 Q6QNY1  

Related Sequences

 
mRNAGenPeptSwissProt
BC020494 AAH20494 Q6QNY1
AY278457 AAQ19606 Q6QNY1
AY531265 AAT00461 Q6QNY1
AK298969 BAG61064 Q6QNY1
AB593084 BAJ84024 F1T0F0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BLOC1S2 NP_776170 R.norvegicus Bloc1s2 293938   NP_001032426 96
M.musculus Gm13540 625631 Gene Info XP_899832 95
M.musculus Bloc1s2 73689 Gene Info NP_082883 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)