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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PGLYRP3, peptidoglycan recognition protein 3
Sequence ID:NM_052891
Entrez Gene ID:114771
Ensembl ID:ENSG00000159527

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 153270337 - 153283194

NM_052891 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1273153270337153270609
274392153271588153271706
393591153274884153275082
592744153276332153276484
745863153277422153277540
8641065153279541153279742
10661173153283086153283193

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262478Full LengthBC069741peptidoglycan recognition protein 3
7262490Full LengthBC069798peptidoglycan recognition protein 3
7262502Full LengthBC069801peptidoglycan recognition protein 3
40112227Full LengthBC128114peptidoglycan recognition protein 3
40112231Full LengthBC128115peptidoglycan recognition protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_443123  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_052891 NP_443123 Q96LB9 Amidase_2

Related Sequences

 
mRNAGenPeptSwissProt
BC069741 AAH69741 Q96LB9
BC069798 AAH69798 Q96LB9
BC069801 AAH69801 Q96LB9
BC128114 AAI28115 Q96LB9
BC128115 AAI28116 Q96LB9
AY035376 AAK72484 Q96LB9
HQ447482 ADQ31968  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PGLYRP3 NP_443123 M.musculus Pglyrp3 242100 Gene Info NP_997130 74
R.norvegicus Pglyrp3 499658   XP_574982 74
R.norvegicus Pglyrp3b 295180   XP_227336 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)