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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GZMH, Granzyme H (cathepsin G-like 2, protein h-CCPX)
Sequence ID:NM_033423
NM_001270780
NM_001270781
Entrez Gene ID:2999
Ensembl ID:ENSG00000100450

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 25075693 - 25078905

Transcript StartTranscript EndChromosomal Start Chromosomal End
1454042507569225075951
4056622507635425076611
6637982507681725076952
7999462507747025077617
94710462507876425078863

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5229314Full LengthBC027974granzyme H (cathepsin G-like 2, protein h-CCPX)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_219491  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270780 NP_001257709    
NM_001270781 NP_001257710    
NM_033423 NP_219491 P20718 Trypsin

Related Sequences

 
mRNAGenPeptSwissProt
M36118 AAA03248 P20718
BC027974 AAH27974 P20718
AY232657 AAP70247 Q6XGZ1
AY232658 AAP70248 Q6XGZ0
DQ892068 ABM82994  
DQ895261 ABM86187  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GZMH NP_219491 R.norvegicus Gzmf 266704   NP_703196 60
M.musculus Gzmg 14944 Gene Info NP_034505 59
M.musculus Gzmf 14943 Gene Info NP_034504 58
M.musculus Gzmd 14941 Gene Info NP_034502 58
M.musculus Gzme 14942 Gene Info NP_034503 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)