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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TAX1BP1, Tax1 (human T-cell leukemia virus type I) binding protein 1
Sequence ID:NM_006024
NM_001206901
NM_001079864
NM_001206902
RefSeqGene ID:NG_029523
Entrez Gene ID:8887
Ensembl ID:ENSG00000106052

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 27779795 - 27868880

 Exon Info From UCSC:
NM_006024
NM_001079864

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6055189Full LengthBC050358Tax1 (human T-cell leukemia virus type I) binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006015  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001079864 NP_001073333    
NM_001206901 NP_001193830    
NM_001206902 NP_001193831    
NM_006024 NP_006015 Q86VP1 CALCOCO1

Related Sequences

 
mRNAGenPeptSwissProt
U33821 AAA75595 Q86VP1
AF090891 AAF24016 Q86VP1
AF268075 AAG03025 Q86VP1
BC050358 AAH50358 Q86VP1
AK314292 BAG36949 A4D196
AK296720 BAG59309 B4DKU7
AK299729 BAG61627 B4DSG5
AK301064 BAG62671 B4DVF9
AL136586 CAB66521 Q86VP1
CR457056 CAG33337 Q86VP1
CR533556 CAG38587 Q86VP1
AM393835 CAL38710  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAX1BP1 NP_006015 M.musculus Tax1bp1 52440 Gene Info NP_080092 88
R.norvegicus Tax1bp1 246244   NP_001004199 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)