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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LMO2, LIM domain only 2 (rhombotin-like 1)
Sequence ID:NM_001142315
NM_001142316
NM_005574
Entrez Gene ID:4005
Ensembl ID:ENSG00000135363

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 33880122 - 33886697

 Exon Info From UCSC:
NM_001142315
NM_001142316
NM_005574

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4796599Full LengthBC034041LIM domain only 2 (rhombotin-like 1)
5186480Full LengthBC035607LIM domain only 2 (rhombotin-like 1)
5188482Full LengthBC042426LIM domain only 2 (rhombotin-like 1)
5734404Full LengthBC073973LIM domain only 2 (rhombotin-like 1)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005565  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142315 NP_001135787    
NM_001142316 NP_001135788    
NM_005574 NP_005565 P25791 LIM

Related Sequences

 
mRNAGenPeptSwissProt
AF257211 AAF98804 P25791
BC034041 AAH34041 P25791
BC035607 AAH35607 P25791
BC042426 AAH42426 P25791
BC073973 AAH73973 P25791
DQ892333 ABM83259  
DQ895538 ABM86464  
X61118 CAA43430 P25791

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LMO2 NP_005565 R.norvegicus Lmo2 362176   NP_001032435 99
M.musculus Lmo2 16909 Gene Info NP_032531 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)