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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GOLGA4, golgin A4
Sequence ID:NM_001172713
NM_002078
Entrez Gene ID:2803
Ensembl ID:ENSG00000144674

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p22-p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 37284766 - 37408236

 Exon Info From UCSC:
NM_001172713
NM_002078

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069099Full LengthBC172405golgi autoantigen, golgin subfamily a, 4
3959585IncompleteBC023648golgi autoantigen, golgin subfamily a, 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002069  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172713 NP_001166184    
NM_002078 NP_002069 Q13439 GRIP

Related Sequences

 
mRNAGenPeptSwissProt
U41740 AAC50434 Q13439
U31906 AAC51791 Q13439
AF273047 AAG34907 Q9H2G3
BC045543 AAH45543 Q49A56
BC050444 AAH50444 Q86W71
BC172405 AAI72405  
AY531221 AAS98194 Q5GHI6
AB209693 BAD92930 Q59EW8
AK290550 BAF83239 A8K3D5
AK300192 BAG61965 B4DTF3
X76942 CAA54261 Q13439
X82834 CAA58041 Q13439

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GOLGA4 NP_002069 M.musculus Golga4 54214 Gene Info NP_061218 72
R.norvegicus Golga4 501069   XP_001061798 71
A.gambiae AgaP_AGAP006884 1270196   XP_308874 26
A.thaliana CIP1 834184   NP_198994 26
D.melanogaster CG3493 37702   NP_611787 25
P.falciparum PF07_0042 2655090   XP_001349015 25
A.thaliana AT1G64330 842739   NP_176615 24

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)