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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TNFRSF13C, tumor necrosis factor receptor superfamily, member 13C
Sequence ID:NM_052945
RefSeqGene ID:NG_007579
Entrez Gene ID:115650
Ensembl ID:ENSG00000159958

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1-q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 42321035 - 42322782

NM_052945 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15234232103542321557
5247544232210442322334
7559344232264142322820

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8144126Full LengthBC105123tumor necrosis factor receptor superfamily, member 13C
8327498Full LengthBC112030tumor necrosis factor receptor superfamily, member 13C
40080564Full LengthBC111585tumor necrosis factor receptor superfamily, member 13C

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_052945 NP_443177 Q5H8V1
Q96RJ3
 

Related Sequences

 
mRNAGenPeptSwissProt
BC105123 AAI05124 Q5H8V1
BC111585 AAI11586  
BC112030 AAI12031 Q5H8V1
AF373846 AAK91826 Q5H8V1
Q96RJ3
AX772914 CAE06271 Q5H8V1
Q96RJ3
AX800072 CAE51828  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNFRSF13C NP_443177 M.musculus Tnfrsf13c 72049 Gene Info NP_082351 61
R.norvegicus Tnfrsf13c 500910   XP_576316 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta