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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNOT3, CCR4-NOT transcription complex, subunit 3
Sequence ID:NM_014516
Entrez Gene ID:4849
Ensembl ID:ENSG00000088038

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 54646664 - 54659446

 Exon Info From UCSC:
NM_014516

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4181383Full LengthBC016474CCR4-NOT transcription complex, subunit 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055331  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014516 NP_055331 O75175 Not3
NOT2_3_5

Related Sequences

 
mRNAGenPeptSwissProt
AF180474 AAF29828 O75175
BC016474 AAH16474 O75175
AB014591 BAA31666 O75175
AK160386 BAD18729 Q6ZMJ6
AK300434 BAH13283 B7Z6J7
AL133647 CAB63766 O75175

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNOT3 NP_055331 M.musculus Cnot3 232791 Gene Info NP_666288 95
A.gambiae AgaP_AGAP009030 1279988   XP_319780 62
D.melanogaster l(2)NC136 35501   NP_610176 49
C.elegans ntl-3 176614   NP_001076652 42
A.thaliana AT5G18230 831941   NP_001154716 40
N.crassa NCU03855 3872012   XP_955865 40
S.pombe not3 2542126   NP_594789 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)