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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. CCBE1, collagen and calcium binding EGF domains 1
Sequence ID:NM_133459
RefSeqGene ID:NG_016990
Entrez Gene ID:147372
Ensembl ID:ENSG00000183287

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:18q21.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 57101148 - 57364612

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5766933Full LengthBC046645collagen and calcium binding EGF domains 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_597716  

Protein Infomation

NM_133459 NP_597716 Q6UXH8 Collagen

Related Sequences

BC046645 AAH46645 Q6UXH8
AY358347 AAQ88713 Q6UXH8
AB075863 BAB85569 Q6UXH8
BX640826 CAE45902 Q6UXH8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens CCBE1 NP_597716 M.musculus Ccbe1 320924 Gene Info NP_848908 90
R.norvegicus Ccbe1 361341   XP_341625 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)