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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LCMT1, Leucine carboxyl methyltransferase 1
Sequence ID:NM_016309
NM_001032391
Entrez Gene ID:51451
Ensembl ID:ENSG00000205629

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 25123174 - 25189549

 Exon Info From UCSC:
NM_016309
NM_001032391

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3533656Full LengthBC001214leucine carboxyl methyltransferase 1
3959936Full LengthBC014217leucine carboxyl methyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057393  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001032391 NP_001027563      
NM_016309 NP_057393 Q9UIC8 EC 2.1.1.233 LCM

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF151826 AAD34063 Q9UIC8 EC 2.1.1.233
AF037601 AAF18267 Q9UIC8 EC 2.1.1.233
BC001214 AAH01214 Q9UIC8 EC 2.1.1.233
BC014217 AAH14217 Q9UIC8 EC 2.1.1.233
HQ448264 ADQ32744    
AK025884 BAB15270 Q9UIC8 EC 2.1.1.233
AK223364 BAD97084 Q9UIC8 EC 2.1.1.233
AK291885 BAF84574 Q9UIC8 EC 2.1.1.233
AK314409 BAG37031 Q9UIC8 EC 2.1.1.233
AL137283 CAB70677 Q9UIC8 EC 2.1.1.233

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LCMT1 NP_057393 M.musculus Lcmt1 30949 Gene Info NP_079580 89
R.norvegicus Lcmt1 361643   NP_955437 89
D.melanogaster CG3793 34928   NP_609766 50
A.gambiae AgaP_AGAP008768 1275625   XP_314892 49
C.elegans B0285.4 175561   NP_497875 41
A.thaliana AT1G02100 837541   NP_973741 37
N.crassa NCU07993 3878802   XP_962663 35
S.pombe SPBP8B7.08c 2541346   NP_596515 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)