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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC8A3, solute carrier family 8 (sodium/calcium exchanger), member 3
Sequence ID:NM_001130417
NM_033262
NM_058240
NM_182932
NM_182936
NM_183002
NM_182933
Entrez Gene ID:6547
Ensembl ID:ENSG00000100678

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 70510933 - 70511260

 Exon Info From UCSC:
NM_001130417
NM_033262
NM_058240
NM_182932
NM_182936
NM_183002

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063950Full LengthBC160014solute carrier family 8 (sodium/calcium exchanger), member 3
5732743IncompleteBC036783solute carrier family 8 (sodium-calcium exchanger), member 3
40148239IncompleteBC150183solute carrier family 8 (sodium/calcium exchanger), member 3
40148714IncompleteBC150193solute carrier family 8 (sodium/calcium exchanger), member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_489479  NP_892114  NP_150287  NP_891981  NP_891977  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130417 NP_001123889    
NM_033262 NP_150287   Na_Ca_ex
Calx-beta
NM_058240 NP_489479   Na_Ca_ex
Calx-beta
NM_182932 NP_891977   Na_Ca_ex
Calx-beta
NM_182936 NP_891981   Na_Ca_ex
NM_183002 NP_892114 P57103 Na_Ca_ex
Calx-beta

Related Sequences

 
mRNAGenPeptSwissProt
BC142969 AAI42970 P57103
BC150183 AAI50184 A7E240
BC150193 AAI50194 A7E249
BC160014 AAI60014  
AF510501 AAN60790 P57103
AF510502 AAN60791 P57103
AF510503 AAN60792 P57103
AK096553 BAG53321 B3KU59
AK122728 BAG53692 B3KV80
AJ304852 CAC40984 P57103
AJ304853 CAC40985 P57103
AJ508602 CAD48420 Q86Y47
BX248763 CAD66570 Q86TQ9
AJ745101 CAG33739 P57103
AJ745102 CAG33740 P57103

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC8A3 NP_489479 R.norvegicus Slc8a3 140448   NP_511175 98
M.musculus Slc8a3 110893 Gene Info NP_536688 95
C.elegans ncx-2 178918   NP_504415 51
A.thaliana MHX 819373   NP_566105 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)