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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STIP1, Stress-induced-phosphoprotein 1
Sequence ID:NM_006819
Entrez Gene ID:10963
Ensembl ID:ENSG00000168439

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 63953696 - 63963348

 Exon Info From UCSC:
NM_006819

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2823157Full LengthBC002987stress-induced-phosphoprotein 1
4830381Full LengthBC039299stress-induced-phosphoprotein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006810  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006819 NP_006810 P31948 TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
M86752 AAA58682 P31948
BC002987 AAH02987 P31948
BC039299 AAH39299 Q3ZCU9
BT020010 AAV38813 P31948
BT020011 AAV38814 P31948
DQ893295 ABM84221  
EU176746 ABW03547  
AK291555 BAF84244 A8K690
AK297319 BAG59782 B4DM70
CR536512 CAG38750 P31948

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STIP1 NP_006810 R.norvegicus Stip1 192277   NP_620266 98
M.musculus Stip1 20867 Gene Info NP_058017 97
A.gambiae AgaP_AGAP010188 1279608   XP_319365 60
C.elegans R09E12.3 178587   NP_503322 57
D.melanogaster Hop 33202   NP_477354 56
A.thaliana AT1G12270 837781   NP_172691 48
A.thaliana AT1G62740 842572   NP_176461 48
A.thaliana AT4G12400 826849   NP_001031620 47
S.pombe sti1 2539474   NP_588123 44
N.crassa NCU00714 3880699   XP_964548 43
S.cerevisiae STI1 854192   NP_014670 42
P.falciparum PF14_0324 811906   XP_001348498 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)