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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TRIM8, Tripartite motif containing 8
Sequence ID:NM_030912
Entrez Gene ID:81603
Ensembl ID:ENSG00000171206

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 104417701 - 104418075

NM_030912 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1693104404251104404943
694789104414409104414504
7901023104414836104415069
10241055104415862104415893
10561171104416026104416141
11722744104416503104418075

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4857393Full LengthBC021925tripartite motif-containing 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112174  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030912 NP_112174 Q9BZR9 zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
AF281046 AAG53087 Q9BZR9
AF220034 AAG53488 Q9BZR9
BC021925 AAH21925 Q9BZR9
DQ892019 ABM82945  
DQ895209 ABM86135  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TRIM8 NP_112174 M.musculus Trim8 93679 Gene Info NP_444330 98
R.norvegicus Trim8 688785   NP_001121555 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)