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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ABAT, 4-aminobutyrate aminotransferase
Sequence ID:NM_000663
NM_001127448
NM_020686
RefSeqGene ID:NG_008432
Entrez Gene ID:18
Ensembl ID:ENSG00000183044

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 8875933 - 8878426

 Exon Info From UCSC:
NM_000663
NM_001127448
NM_020686

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4844316Full LengthBC0156284-aminobutyrate aminotransferase
5195212Full LengthBC0314134-aminobutyrate aminotransferase
3028193IncompleteBC0139654-aminobutyrate aminotransferase
4156159IncompleteBC0089904-aminobutyrate aminotransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065737  NP_000654  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000663 NP_000654 P80404 EC 2.6.1.19
EC 2.6.1.22
Aminotran_3
NM_001127448 NP_001120920      
NM_020686 NP_065737 P80404 EC 2.6.1.19
EC 2.6.1.22
Aminotran_3

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L32961 AAA74449 P80404 EC 2.6.1.19
EC 2.6.1.22
U80226 AAB38510 P80404 EC 2.6.1.19
EC 2.6.1.22
S75578 AAD14176 P80404 EC 2.6.1.19
EC 2.6.1.22
AF237813 AAG09758 Q9HBH6  
BC015628 AAH15628 P80404 EC 2.6.1.19
EC 2.6.1.22
BC031413 AAH31413 P80404 EC 2.6.1.19
EC 2.6.1.22
DQ893069 ABM83995    
DQ896323 ABM87322    
AK290501 BAF83190 P80404 EC 2.6.1.19
EC 2.6.1.22
AK293983 BAH11640 B7Z1V4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABAT NP_000654 R.norvegicus Abat 81632   NP_112265 92
M.musculus Abat 268860 Gene Info NP_766549 91
D.melanogaster CG7433 40188   NP_001163479 56
A.gambiae AgaP_AGAP006966 1270119   XP_001688095 54
N.crassa NCU08998 3875148   XP_959026 50
C.elegans gta-1 177897   NP_501862 48
S.pombe uga1 2542494   NP_594905 45
S.cerevisiae UGA1 852902   NP_011533 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)