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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZFP42, ZFP42 zinc finger protein
Sequence ID:NM_174900
Entrez Gene ID:132625
Ensembl ID:ENSG00000179059

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q35.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 188923961 - 188924894

NM_174900 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
170188916924188916993
71236188920261188920426
237313188920762188920838
3142646188923866188926198

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063992Full LengthBC160056zinc finger protein 42 homolog (mouse)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_777560  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_174900 NP_777560 Q96MM3 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC160056 AAI60056  
AF450454 AAL47167 Q96MM3
AY429593 AAR07993 Q96MM3
AK056719 BAB71264 Q96MM3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZFP42 NP_777560 R.norvegicus LOC100361947 100361947   XP_002728454 60
R.norvegicus LOC100361902 100361902   XP_002729472 59
M.musculus Zfp42 22702 Gene Info NP_033582 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)