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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. F13A1, coagulation factor XIII, A1 polypeptide
Sequence ID:NM_000129
RefSeqGene ID:NG_008107
Entrez Gene ID:2162
Ensembl ID:ENSG00000124491

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
FACTOR XIIIA DEFICIENCY 
MYOCARDIAL INFARCTIONESR1
F7
GCLC
GCLM
ITGB3
LGALS2
LRP8
LTA
MIAT
OLR1
PSMA6
THBD
TNFSF4
THROMBOPHILIA DUE TO THROMBIN DEFECTF2
HABP2
MTHFR
MTHFR

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p25.3-p24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 6144317 - 6320876

 Exon Info From UCSC:
NM_000129

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5222962Full LengthBC027963coagulation factor XIII, A1 polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000120  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000129 NP_000120   Transglut_N
Transglut_C
Transglut_core

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M14354 AAA52488 P00488 EC 2.3.2.13
M14539 AAA52489 P00488 EC 2.3.2.13
BC027963 AAH27963 P00488 EC 2.3.2.13
DQ893561 ABM84487    
DQ894109 ABM85035    
EU176539 ABW03340    
AB208852 BAD92089 P00488 EC 2.3.2.13
AK312735 BAG35606 B2R6V9  
AK304335 BAG65180 B4E2L8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens F13A1 NP_000120 M.musculus F13a1 74145 Gene Info NP_083060 87
R.norvegicus F13a1 60327   NP_067730 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta