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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MAP1B, microtubule-associated protein 1B
Sequence ID:NM_032010
NM_005909
Entrez Gene ID:4131
Ensembl ID:ENSG00000131711

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, testis, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 71494053 - 71494549

Transcript StartTranscript EndChromosomal Start Chromosomal End
14257140311771403541
4265277141152471411625
5286107147956971479651
6117517148244071482580
75272537148969271496193
725474927149938971499627
7493119787150091071505395

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069082Full LengthBC172388microtubule-associated protein 1B
3877752IncompleteBC108733microtubule-associated protein 1B
3946958IncompleteBC025240microtubule-associated protein 1B
4138145IncompleteBC017240microtubule-associated protein 1B
4179446IncompleteBC063669microtubule-associated protein 1B
4414733IncompleteBC046114microtubule-associated protein 1B
5493646IncompleteBC032516microtubule-associated protein 1B
5550730IncompleteBC039822microtubule-associated protein 1B
5802796IncompleteBC094834microtubule-associated protein 1B
6144130IncompleteBC073993microtubule-associated protein 1B
6155369IncompleteBC056145microtubule-associated protein 1B
8860354IncompleteBC141853microtubule-associated protein 1B
40148262IncompleteBC139918microtubule-associated protein 1B
40148774IncompleteBC150196microtubule-associated protein 1B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005900  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005909 NP_005900 P46821 MAP1B_neuraxin

Related Sequences

 
mRNAGenPeptSwissProt
BC017240 AAH17240 Q6PJD3
BC032516 AAH32516 Q05BW8
BC046114 AAH46114 Q86X89
BC094834 AAH94834 Q4VBY4
BC108733 AAI08734 Q32NB7
BC139918 AAI39919 A5D6X1
BC141853 AAI41854 A5D8X6
BC150196 AAI50197 A5D6X1
BC172388 AAI72388 P46821
CR933720 CAI46250 Q5H9P1
BN001084 CAM06633 P46821
BN001085 CAM12311 A2BDK6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MAP1B NP_005900 M.musculus Mtap1b 17755 Gene Info NP_032660 91
R.norvegicus Map1b 29456   NP_062090 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)