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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PVRL1, poliovirus receptor-related 1 (herpesvirus entry mediator C)
Sequence ID:NM_002855
NM_203285
NM_203286
NM_032767
RefSeqGene ID:NG_013083
Entrez Gene ID:5818
Ensembl ID:ENSG00000110400

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CLEFT LIP/PALATE-ECTODERMAL DYSPLASIA SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 119535456 - 119599419

 Exon Info From UCSC:
NM_002855
NM_203285
NM_203286

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143951Full LengthBC104948poliovirus receptor-related 1 (herpesvirus entry mediator C)
8322523Full LengthBC113471poliovirus receptor-related 1 (herpesvirus entry mediator C)
3641285IncompleteBC007379poliovirus receptor-related 1 (herpesvirus entry mediator C; nectin)
3947125IncompleteBC021976poliovirus receptor-related 1 (herpesvirus entry mediator C; nectin)
5497494IncompleteBC044230poliovirus receptor-related 1 (herpesvirus entry mediator C; nectin)
6106742IncompleteBC086309poliovirus receptor-related 1 (herpesvirus entry mediator C; nectin)
6199960IncompleteBC064140poliovirus receptor-related 1 (herpesvirus entry mediator C; nectin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002846  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002855 NP_002846 Q15223 ig
V-set
C2-set_2
NM_203285 NP_976030    
NM_203286 NP_976031    

Related Sequences

 
mRNAGenPeptSwissProt
AF060231 AAC23798 Q15223
AF110314 AAD04944  
BC104948 AAI04949 Q15223
BC113471 AAI13472 Q15223
AY029539 AAK33124 Q15223
HQ258297 ADR83051  
X76400 CAA53980 Q15223

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PVRL1 NP_002846 M.musculus Pvrl1 58235 Gene Info NP_067399 95
R.norvegicus Pvrl1 192183   XP_236210 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)