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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MICAL1, microtubule associated monoxygenase, calponin and LIM domain containing 1
Sequence ID:NM_001159291
NM_022765
Entrez Gene ID:64780
Ensembl ID:ENSG00000135596

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 109765265 - 109777190

 Exon Info From UCSC:
NM_001159291
NM_022765

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4304203Full LengthBC009972microtubule associated monoxygenase, calponin and LIM domain containing 1
5756097Full LengthBC052983microtubule associated monoxygenase, calponin and LIM domain containing 1
5929774Full LengthBC042144microtubule associated monoxygenase, calponin and LIM domain containing 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159291 NP_001152763    
NM_022765 NP_073602 Q8TDZ2  

Related Sequences

 
mRNAGenPeptSwissProt
BC009972 AAH09972 Q8TDZ2
BC042144 AAH42144 Q8TDZ2
BC052983 AAH52983 Q8TDZ2
AK021999 BAB13949 Q8TDZ2
AK025392 BAB15124 Q8TDZ2
AK024500 BAB15790 Q8TDZ2
AB048948 BAB86289 Q8TDZ2
AK160384 BAD18727 Q6ZMJ8
AK296284 BAH12301 Q8TDZ2
AL122098 CAB59266 Q8TDZ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MICAL1 NP_073602 M.musculus Mical1 171580 Gene Info NP_612188 82
R.norvegicus Mical1 294520   NP_001099867 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)