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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HVCN1, hydrogen voltage-gated channel 1
Sequence ID:NM_001040107
NM_001256413
NM_032369
Entrez Gene ID:84329
Ensembl ID:ENSG00000122986

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 111086937 - 111127583

 Exon Info From UCSC:
NM_001040107
NM_032369

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3343102Full LengthBC007277hydrogen voltage-gated channel 1
3877292Full LengthBC009731hydrogen voltage-gated channel 1
5577070Full LengthBC032672hydrogen voltage-gated channel 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115745  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001040107 NP_001035196 Q96D96  
NM_001256413 NP_001243342    
NM_032369 NP_115745   Ion_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC007277 AAH07277 Q96D96
BC009731 AAH09731 Q96D96
BC032672 AAH32672 Q96D96
AY359054 AAQ89413 Q96D96
GU211002 ADA61023 D2KFF9
JF432642 ADZ15859  
AK293543 BAG57024 B4DEB3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HVCN1 NP_001035196 M.musculus Hvcn1 74096 Gene Info NP_083028 79
R.norvegicus RGD1310788 304485   XP_002728018 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)