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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RBPMS, RNA binding protein with multiple splicing
Sequence ID:NM_001008710
NM_001008711
NM_001008712
NM_006867
RefSeqGene ID:NG_029534
Entrez Gene ID:11030
Ensembl ID:ENSG00000157110

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 30428584 - 30430508

 Exon Info From UCSC:
NM_001008710
NM_001008711
NM_001008712
NM_006867

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3505124Full LengthBC003608RNA binding protein with multiple splicing
4837343Full LengthBC092476RNA binding protein with multiple splicing
5404653IncompleteBC063494RNA binding protein with multiple splicing

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001008712  NP_006858  NP_001008711  NP_001008710  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008710 NP_001008710 Q93062 RRM_1
NM_001008711 NP_001008711   RRM_1
NM_001008712 NP_001008712   RRM_1
NM_006867 NP_006858 Q93062 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC003608 AAH03608 Q93062
BC092476 AAH92476 Q569H2
D84107 BAA12225 Q93062
D84108 BAA12226 Q93062
D84109 BAA12227 Q93062
D84110 BAA12228 Q93062
D84111 BAA12229 Q93062
AK304858 BAG65596 B4E3T4
XM_001723852 XP_001723904  
XM_001724099 XP_001724151  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RBPMS NP_001008711 R.norvegicus Rbpms 498642   XP_573923 99
M.musculus Rbpms 19663 Gene Info NP_001036140 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)