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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SMC1B, Structural maintenance of chromosomes 1B
Sequence ID:NM_148674
Entrez Gene ID:27127
Ensembl ID:ENSG00000077935

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 45740357 - 45809500

 Exon Info From UCSC:
NM_148674

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991924Full LengthBC126208structural maintenance of chromosomes 1B

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_148674 NP_683515    

Related Sequences

 
mRNAGenPeptSwissProt
BC126208 AAI26209 Q8NDV3
AK125736 BAC86266 Q8NDV3
AJ504806 CAD43404 Q8NDV3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMC1B NP_683515 R.norvegicus Smc1b 300121   NP_001123970 84
M.musculus Smc1b 140557 Gene Info NP_536718 83
P.falciparum PF11_0317 810864   XP_001347988 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)