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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRKCH, Protein kinase C, eta
Sequence ID:NM_006255
RefSeqGene ID:NG_011514
Entrez Gene ID:5583
Ensembl ID:ENSG00000027075

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
CEREBRAL INFARCTIONALOX5AP
F2
F5
NOS3

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 61788819 - 62016548

 Exon Info From UCSC:
NM_006255

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4822159Full LengthBC037268protein kinase C, eta

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006246  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006255 NP_006246 P24723 EC 2.7.11.13 Pkinase
C1_1
C2
Pkinase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M55284 AAA60100 P24723 EC 2.7.11.13
S74620 AAB32724 P24723 EC 2.7.11.13
BC001000 AAH01000 Q9BVQ0  
BC037268 AAH37268 P24723 EC 2.7.11.13
DQ890890 ABM81816    
DQ894045 ABM84971    
AK290183 BAF82872 P24723 EC 2.7.11.13
AK296158 BAG58897 B4DJN5  
AK300864 BAG62513 B4DV01  
AB451313 BAG70127 B5BU77  
AX775931 CAE11665    
AX775933 CAE11666    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRKCH NP_006246 M.musculus Prkch 18755 Gene Info NP_032882 98
R.norvegicus Prkch 81749   NP_112347 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta