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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PSMA2, proteasome (prosome, macropain) subunit, alpha type, 2
Sequence ID:NM_002787
Entrez Gene ID:5683
Ensembl ID:ENSG00000106588

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 42957073 - 42971773

NM_002787 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
58304295646342957288
8318884295737642957433
8899624296145642961529
96310444296292342963004
104511674296427342964395
116813004296613442966266
130113774296698142967057
137814664297171642971804

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5786518Full LengthBC047697proteasome (prosome, macropain) subunit, alpha type, 2
3942625IncompleteBC002900proteasome (prosome, macropain) subunit, alpha type, 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002778  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002787 NP_002778 P25787 EC 3.4.25.1 Proteasome

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC002900 AAH02900 P25787 EC 3.4.25.1
BC047697 AAH47697 P25787 EC 3.4.25.1
HQ448587 ADQ33065    
D00760 BAA00657 P25787 EC 3.4.25.1
AK222976 BAD96696 Q53GF5  
AK290654 BAF83343 P25787 EC 3.4.25.1
BX641097 CAE46046 Q6MZI6  
CR450317 CAG29313 P25787 EC 3.4.25.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSMA2 NP_002778 M.musculus Psma2 19166 Gene Info NP_032970 100
R.norvegicus Psma2 29669   NP_058975 100
A.gambiae AgaP_AGAP001995 1281126   XP_550819 82
D.melanogaster Pros25 41531   NP_524328 78
C.elegans pas-2 179493   NP_505750 68
N.crassa NCU06764 3879660   XP_963536 67
A.thaliana PAB1 838217   NP_001031057 66
A.thaliana AT1G79210 844262   NP_001077846 66
S.pombe pre8 2539026   NP_588320 66
S.cerevisiae PRE8 854882   NP_013618 62
P.falciparum PFF0420c 3885908   XP_966075 58

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)