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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PARPBP, PARP1 binding protein
Sequence ID:NM_017915
Entrez Gene ID:55010
Ensembl ID:ENSG00000185480

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 102513972 - 102590146

 Exon Info From UCSC:
NM_017915

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40025466Full LengthBC098313chromosome 12 open reading frame 48
4698572IncompleteBC030962chromosome 12 open reading frame 48
6714268IncompleteBC070270chromosome 12 open reading frame 48
40025464IncompleteBC099844chromosome 12 open reading frame 48
40025469IncompleteBC099734chromosome 12 open reading frame 48

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017915 NP_060385 Q9NWS1  

Related Sequences

 
mRNAGenPeptSwissProt
BC018903 AAH18903 Q9NWS1
BC030962 AAH30962 Q9NWS1
BC050696 AAH50696 Q9NWS1
BC070270 AAH70270 Q9NWS1
BC098313 AAH98313 Q9NWS1
BC099734 AAH99734 Q9NWS1
BC099844 AAH99844 Q9NWS1
AF274940 AAK07517 Q9BZU5
AK000648 BAA91306 Q9NWS1
AK300041 BAG61852 B4DT40
AK302724 BAG63943 B4DZ31
AK303571 BAG64592 Q9NWS1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PARPBP NP_060385 M.musculus 4930547N16Rik 75317 Gene Info NP_083525 70
R.norvegicus LOC100310874 100310874   NP_001160148 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)