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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DEFB1, defensin, beta 1
Sequence ID:NM_005218
Entrez Gene ID:1672
Ensembl ID:ENSG00000164825

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 6728113 - 6735439

NM_005218 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2227367280966728347
27448467353186735528

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4775720Full LengthBC033298defensin, beta 1
5759899Full LengthBC047677defensin, beta 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005209  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005218 NP_005209 P60022 Defensin_beta

Related Sequences

 
mRNAGenPeptSwissProt
U73945 AAB49758 P60022
BC033298 AAH33298 P60022
BC047677 AAH47677 P60022
HQ448540 ADQ33019  
X92744 CAA63405 P60022
Z50788 CAA90650 P60022

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)