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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SPTBN4, spectrin, beta, non-erythrocytic 4
Sequence ID:NM_020971
NM_025213
RefSeqGene ID:NG_029905
Entrez Gene ID:57731
Ensembl ID:ENSG00000160460

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 41008366 - 41076462

 Exon Info From UCSC:
NM_020971
NM_025213

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066022  NP_079489  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020971 NP_066022 Q9H254 PH
CH
Spectrin
NM_025213 NP_079489   PH
CH
Spectrin

Related Sequences

 
mRNAGenPeptSwissProt
AY004226 AAF93171 Q9H254
AY004227 AAF93173 Q9H254
AF082075 AAG38874 Q9H254
AF311855 AAG42473 Q9H254
AF311856 AAG42474 Q9H253
AF324064 AAQ14859 Q71S06
AF324063 AAQ14860 E9PDB1
AB046862 BAB13468 Q9H254
AL133093 CAB61407 Q9UFA1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPTBN4 NP_066022 M.musculus Spnb4 80297 Gene Info NP_115999 96
R.norvegicus Sptbn4 308458   XP_218364 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)