Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SNPH, syntaphilin
Sequence ID:NM_014723
Entrez Gene ID:9751
Ensembl ID:ENSG00000101298

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 1246998 - 1289969

NM_014723 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18212469591247040
8318912472971247403
19028612769681277064
28739412777881277895
39554412812051281354
545499212855211289968

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5727912Full LengthBC035788syntaphilin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014723 NP_055538 O15079  

Related Sequences

 
mRNAGenPeptSwissProt
AF187733 AAF29901 O15079
BC035788 AAH35788 O15079
HQ447295 ADQ31782  
AB002372 BAA20829 O15079

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNPH NP_055538 M.musculus Snph 241727 Gene Info NP_937857 92
R.norvegicus Snph 296267   NP_001099995 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)